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Description : HCF153 protein involved in cytochrome b6/f complex assembly
Gene families : OG0011531 (Archaeplastida) Phylogenetic Tree(s): OG0011531_tree ,
OG_05_0011431 (LandPlants) Phylogenetic Tree(s): OG_05_0011431_tree ,
OG_06_0011530 (SeedPlants) Phylogenetic Tree(s): OG_06_0011530_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g71330.1 | |
| Cluster | HCCA: Cluster_208 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00131p00026330 | evm_27.TU.AmTr_v1... | Photosynthesis.photophosphorylation.cytochrome b6/f... | 0.02 | Archaeplastida | |
| Gb_19586 | No alias | HCF153 protein involved in cytochrome b6/f complex assembly | 0.05 | Archaeplastida | |
| Solyc01g068190.3.1 | No alias | HCF153 protein involved in cytochrome b6/f complex assembly | 0.07 | Archaeplastida | |
| Zm00001e018686_P001 | No alias | HCF153 protein involved in cytochrome b6/f complex assembly | 0.1 | Archaeplastida | |
| Zm00001e028341_P001 | No alias | HCF153 protein involved in cytochrome b6/f complex assembly | 0.1 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0003747 | translation release factor activity | IEP | Neighborhood |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| CC | GO:0005886 | plasma membrane | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006415 | translational termination | IEP | Neighborhood |
| BP | GO:0006450 | regulation of translational fidelity | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| MF | GO:0008079 | translation termination factor activity | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| CC | GO:0009512 | cytochrome b6f complex | IEP | Neighborhood |
| CC | GO:0009521 | photosystem | IEP | Neighborhood |
| CC | GO:0009523 | photosystem II | IEP | Neighborhood |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
| BP | GO:0010207 | photosystem II assembly | IEP | Neighborhood |
| BP | GO:0015979 | photosynthesis | IEP | Neighborhood |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Neighborhood |
| BP | GO:0022411 | cellular component disassembly | IEP | Neighborhood |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043624 | cellular protein complex disassembly | IEP | Neighborhood |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044436 | thylakoid part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| CC | GO:0070069 | cytochrome complex | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |