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  5. LOC_Os01g71700.1

LOC_Os01g71700.1


Description : gamma-aminobutyric acid transporter (GABP)


Gene families : OG0000749 (Archaeplastida) Phylogenetic Tree(s): OG0000749_tree ,
OG_05_0000596 (LandPlants) Phylogenetic Tree(s): OG_05_0000596_tree ,
OG_06_0000576 (SeedPlants) Phylogenetic Tree(s): OG_06_0000576_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g71700.1
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AT2G01170 BAT1 bidirectional amino acid transporter 1 0.03 Archaeplastida
GSVIVT01008812001 No alias Solute transport.carrier-mediated transport.APC... 0.04 Archaeplastida
Gb_25392 No alias Amino-acid permease BAT1 homolog OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_10426763g0010 No alias Amino-acid permease BAT1 homolog OS=Oryza sativa subsp.... 0.04 Archaeplastida
MA_446696g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6210082g0010 No alias Amino-acid permease BAT1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c14_1980V3.1 No alias bidirectional amino acid transporter 1 0.04 Archaeplastida
Pp3c3_22090V3.1 No alias bidirectional amino acid transporter 1 0.06 Archaeplastida
Smo438585 No alias Solute transport.carrier-mediated transport.APC... 0.05 Archaeplastida
Smo95941 No alias Solute transport.carrier-mediated transport.APC... 0.05 Archaeplastida
Zm00001e018674_P001 No alias gamma-aminobutyric acid transporter (GABP) 0.03 Archaeplastida
Zm00001e018676_P002 No alias gamma-aminobutyric acid transporter (GABP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 36 492
No external refs found!