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  5. LOC_Os01g71780.1

LOC_Os01g71780.1


Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 202.0)


Gene families : OG0000380 (Archaeplastida) Phylogenetic Tree(s): OG0000380_tree ,
OG_05_0000225 (LandPlants) Phylogenetic Tree(s): OG_05_0000225_tree ,
OG_06_0000140 (SeedPlants) Phylogenetic Tree(s): OG_06_0000140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g71780.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00256130 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G26490 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
AT3G50390 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
Smo66275 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e005608_P001 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 364 402
IPR001680 WD40_repeat 219 253
IPR001680 WD40_repeat 185 213
No external refs found!