LOC_Os01g72030.1

Description : no hits & (original description: none)

Gene families : OG0012938 (Archaeplastida) Phylogenetic Tree(s): OG0012938_tree ,
OG_05_0012092 (LandPlants) Phylogenetic Tree(s): OG_05_0012092_tree ,
OG_06_0012184 (SeedPlants) Phylogenetic Tree(s): OG_06_0012184_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g72030.1
Cluster	HCCA: Cluster_627

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os08g34230.1	No alias	no hits & (original description: none)	0.06	Archaeplastida
LOC_Os09g15960.1	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	371	387
IPR005162	Retrotrans_gag_dom	183	276

External Links

No external refs found!