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Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana (sp|q9m1s3|arp1_arath : 115.0)
Gene families : OG0000639 (Archaeplastida) Phylogenetic Tree(s): OG0000639_tree ,
OG_05_0000548 (LandPlants) Phylogenetic Tree(s): OG_05_0000548_tree ,
OG_06_0000334 (SeedPlants) Phylogenetic Tree(s): OG_06_0000334_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g72834.1 | |
| Cluster | HCCA: Cluster_322 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00080p00053460 | evm_27.TU.AmTr_v1... | Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| AMTR_s00099p00115860 | evm_27.TU.AmTr_v1... | Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana | 0.07 | Archaeplastida | |
| AT3G54770 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | Archaeplastida | |
| AT5G53720 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.04 | Archaeplastida | |
| GSVIVT01037134001 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| LOC_Os02g48340.1 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| MA_10429182g0010 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| MA_1682g0010 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| Pp3c10_3350V3.1 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | Archaeplastida | |
| Solyc04g049920.4.1 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| Zm00001e015892_P001 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.07 | Archaeplastida | |
| Zm00001e023856_P001 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.08 | Archaeplastida | |
| Zm00001e037573_P001 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0033897 | ribonuclease T2 activity | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| MF | GO:0043531 | ADP binding | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 23 | 78 |
| No external refs found! |