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  5. LOC_Os01g72860.1

LOC_Os01g72860.1


Description : MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana (sp|q9stw5|macp2_arath : 802.0)


Gene families : OG0000683 (Archaeplastida) Phylogenetic Tree(s): OG0000683_tree ,
OG_05_0002987 (LandPlants) Phylogenetic Tree(s): OG_05_0002987_tree ,
OG_06_0002394 (SeedPlants) Phylogenetic Tree(s): OG_06_0002394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g72860.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00141350 evm_27.TU.AmTr_v1... MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00162p00048220 evm_27.TU.AmTr_v1... MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_16359 No alias MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.04 Archaeplastida
MA_10436626g0030 No alias MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.05 Archaeplastida
Pp3c2_21470V3.1 No alias MAC/Perforin domain-containing protein 0.02 Archaeplastida
Smo234182 No alias MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc02g071780.3.1 No alias MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.02 Archaeplastida
Solyc02g077780.3.1 No alias MACPF domain-containing protein NSL1 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e028292_P001 No alias MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e029054_P001 No alias MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008430 selenium binding IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR020864 MACPF 108 319
No external refs found!