- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : transcription factor (MADS/AGL)
Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g74440.1 | |
| Cluster | HCCA: Cluster_111 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G04100 | AGL57 | AGAMOUS-like 57 | 0.03 | Archaeplastida | |
| AT3G30260 | AGL79 | AGAMOUS-like 79 | 0.03 | Archaeplastida | |
| Gb_03068 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| LOC_Os01g66030.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| LOC_Os09g02830.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| MA_19007g0010 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Zm00001e039610_P001 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | Neighborhood |
| MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| CC | GO:0005576 | extracellular region | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| BP | GO:0006952 | defense response | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009607 | response to biotic stimulus | IEP | Neighborhood |
| BP | GO:0009620 | response to fungus | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| BP | GO:0032200 | telomere organization | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
| BP | GO:0043207 | response to external biotic stimulus | IEP | Neighborhood |
| BP | GO:0050832 | defense response to fungus | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0051704 | multi-organism process | IEP | Neighborhood |
| BP | GO:0051707 | response to other organism | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Neighborhood |
| BP | GO:0065008 | regulation of biological quality | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0098542 | defense response to other organism | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 24 | 71 |
| No external refs found! |