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  5. LOC_Os02g01960.1

LOC_Os02g01960.1


Description : regulatory protein (CMU) of microtubule-dependent CSC insertion


Gene families : OG0000558 (Archaeplastida) Phylogenetic Tree(s): OG0000558_tree ,
OG_05_0001108 (LandPlants) Phylogenetic Tree(s): OG_05_0001108_tree ,
OG_06_0003036 (SeedPlants) Phylogenetic Tree(s): OG_06_0003036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g01960.1
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AT3G27960 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
GSVIVT01027175001 No alias Protein KINESIN LIGHT CHAIN-RELATED 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032474001 No alias Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_10389075g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_10428479g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10430767g0010 No alias Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis... 0.09 Archaeplastida
MA_50635g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_760658g0010 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.04 Archaeplastida
MA_760658g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8566391g0010 No alias Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c6_8860V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
Solyc08g008460.2.1 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.03 Archaeplastida
Zm00001e013426_P003 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.05 Archaeplastida
Zm00001e015601_P001 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.03 Archaeplastida
Zm00001e023340_P002 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.1 Archaeplastida
Zm00001e025391_P001 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004506 squalene monooxygenase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!