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  5. LOC_Os02g02580.1

LOC_Os02g02580.1


Description : Protein trichome birefringence-like 12 OS=Arabidopsis thaliana (sp|q9fge9|tbl12_arath : 474.0)


Gene families : OG0003162 (Archaeplastida) Phylogenetic Tree(s): OG0003162_tree ,
OG_05_0002144 (LandPlants) Phylogenetic Tree(s): OG_05_0002144_tree ,
OG_06_0002132 (SeedPlants) Phylogenetic Tree(s): OG_06_0002132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g02580.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Solyc01g106590.4.1 No alias Protein trichome birefringence-like 13 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e035022_P004 No alias Protein trichome birefringence-like 13 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
CC GO:0030915 Smc5-Smc6 complex IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
CC GO:0106068 SUMO ligase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 102 392
IPR025846 PMR5_N_dom 48 97
No external refs found!