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  5. LOC_Os02g03890.1

LOC_Os02g03890.1


Description : mRNA endoribonuclease (G3BP)


Gene families : OG0000605 (Archaeplastida) Phylogenetic Tree(s): OG0000605_tree ,
OG_05_0009435 (LandPlants) Phylogenetic Tree(s): OG_05_0009435_tree ,
OG_06_0006825 (SeedPlants) Phylogenetic Tree(s): OG_06_0006825_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g03890.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AT1G69250 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.04 Archaeplastida
MA_93209g0010 No alias mRNA endoribonuclease (G3BP) 0.02 Archaeplastida
Zm00001e014590_P001 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP