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  5. LOC_Os02g04160.1

LOC_Os02g04160.1


Description : Transcription elongation factor 1 homolog OS=Oryza sativa subsp. japonica (sp|q8lhp0|elof1_orysj : 125.0)


Gene families : OG0002551 (Archaeplastida) Phylogenetic Tree(s): OG0002551_tree ,
OG_05_0002997 (LandPlants) Phylogenetic Tree(s): OG_05_0002997_tree ,
OG_06_0002978 (SeedPlants) Phylogenetic Tree(s): OG_06_0002978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g04160.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Solyc02g077440.3.1 No alias Transcription elongation factor 1 homolog OS=Oryza... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR007808 Elf1 2 78
No external refs found!