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  5. AMTR_s00002p00259770

AMTR_s00002p00259770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.439

Description : Redox homeostasis.cytosol/mitochondrion/nucleus redox homeostasis.H-type thioredoxin


Gene families : OG0000190 (Archaeplastida) Phylogenetic Tree(s): OG0000190_tree ,
OG_05_0000464 (LandPlants) Phylogenetic Tree(s): OG_05_0000464_tree ,
OG_06_0000768 (SeedPlants) Phylogenetic Tree(s): OG_06_0000768_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00259770
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00259670 evm_27.TU.AmTr_v1... Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.06 Archaeplastida
AT1G45145 ATH5, ATTRX5, TRX5, LIV1 thioredoxin H-type 5 0.03 Archaeplastida
AT1G59730 TH7, ATH7 thioredoxin H-type 7 0.02 Archaeplastida
Gb_08866 No alias H-type thioredoxin 0.02 Archaeplastida
LOC_Os07g09310.1 No alias H-type thioredoxin 0.03 Archaeplastida
MA_102049g0010 No alias H-type thioredoxin 0.04 Archaeplastida
MA_167813g0010 No alias H-type thioredoxin 0.03 Archaeplastida
MA_7727794g0010 No alias H-type thioredoxin 0.03 Archaeplastida
Mp5g19690.1 No alias H-type thioredoxin 0.02 Archaeplastida
Solyc04g005810.3.1 No alias H-type thioredoxin 0.03 Archaeplastida
Solyc05g006830.3.1 No alias H-type thioredoxin 0.05 Archaeplastida
Zm00001e033006_P001 No alias H-type thioredoxin 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005231 excitatory extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 51 143
No external refs found!