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  5. AMTR_s00002p00260500

AMTR_s00002p00260500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.444

Description : DnaJ protein homolog 2 OS=Allium porrum


Gene families : OG0000519 (Archaeplastida) Phylogenetic Tree(s): OG0000519_tree ,
OG_05_0000397 (LandPlants) Phylogenetic Tree(s): OG_05_0000397_tree ,
OG_06_0000303 (SeedPlants) Phylogenetic Tree(s): OG_06_0000303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00260500
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Cre10.g420100 No alias DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01008076001 No alias DnaJ protein homolog 1 (Fragment) OS=Allium porrum 0.03 Archaeplastida
GSVIVT01021112001 No alias DnaJ protein ERDJ3B OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01035724001 No alias Chaperone protein dnaJ 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_04555 No alias co-chaperone (Hsp40) 0.04 Archaeplastida
LOC_Os05g48810.1 No alias co-chaperone (Hsp40) 0.02 Archaeplastida
Pp3c12_2810V3.1 No alias DNAJ heat shock family protein 0.03 Archaeplastida
Pp3c15_3820V3.1 No alias DNAJ heat shock family protein 0.03 Archaeplastida
Smo230025 No alias DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Solyc02g077670.3.1 No alias co-chaperone (Hsp40) 0.02 Archaeplastida
Solyc11g044450.3.1 No alias DnaJ protein homolog 1 (Fragment) OS=Allium porrum... 0.02 Archaeplastida
Zm00001e025301_P001 No alias co-chaperone (Hsp40) 0.02 Archaeplastida
Zm00001e026140_P001 No alias co-chaperone (Hsp40) 0.02 Archaeplastida
Zm00001e026521_P002 No alias co-chaperone (Hsp40) 0.04 Archaeplastida
Zm00001e032418_P001 No alias co-chaperone (Hsp40) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004325 ferrochelatase activity IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0006915 apoptotic process IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008430 selenium binding IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0012501 programmed cell death IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0017003 protein-heme linkage IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0017006 protein-tetrapyrrole linkage IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 4 67
IPR002939 DnaJ_C 257 336
No external refs found!