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  5. LOC_Os02g06660.1

LOC_Os02g06660.1


Description : GTPase effector (RIC)


Gene families : OG0001059 (Archaeplastida) Phylogenetic Tree(s): OG0001059_tree ,
OG_05_0000659 (LandPlants) Phylogenetic Tree(s): OG_05_0000659_tree ,
OG_06_0000439 (SeedPlants) Phylogenetic Tree(s): OG_06_0000439_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g06660.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G27380 RIC2 ROP-interactive CRIB motif-containing protein 2 0.08 Archaeplastida
AT1G61795 No alias PAK-box/P21-Rho-binding family protein 0.03 Archaeplastida
AT2G20430 RIC6 ROP-interactive CRIB motif-containing protein 6 0.02 Archaeplastida
AT2G33460 RIC1 ROP-interactive CRIB motif-containing protein 1 0.04 Archaeplastida
AT4G21745 No alias PAK-box/P21-Rho-binding family protein 0.05 Archaeplastida
AT5G16490 RIC4 ROP-interactive CRIB motif-containing protein 4 0.05 Archaeplastida
GSVIVT01019115001 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 Archaeplastida
LOC_Os03g63060.1 No alias GTPase effector (RIC) 0.04 Archaeplastida
LOC_Os04g53580.1 No alias GTPase effector (RIC) 0.04 Archaeplastida
LOC_Os06g46754.1 No alias GTPase effector (RIC) 0.06 Archaeplastida
LOC_Os07g26480.2 No alias GTPase effector (RIC) 0.04 Archaeplastida
LOC_Os11g28310.1 No alias GTPase effector (RIC) 0.04 Archaeplastida
MA_698612g0010 No alias GTPase effector (RIC) 0.04 Archaeplastida
Solyc09g072640.3.1 No alias GTPase effector (RIC) 0.02 Archaeplastida
Solyc09g098425.1.1 No alias GTPase effector (RIC) 0.02 Archaeplastida
Solyc11g008880.2.1 No alias GTPase effector (RIC) 0.05 Archaeplastida
Zm00001e006356_P004 No alias GTPase effector (RIC) 0.03 Archaeplastida
Zm00001e009549_P001 No alias GTPase effector (RIC) 0.05 Archaeplastida
Zm00001e013704_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e018847_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e021470_P001 No alias GTPase effector (RIC) 0.05 Archaeplastida
Zm00001e033401_P001 No alias GTPase effector (RIC) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000095 CRIB_dom 27 58
No external refs found!