1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g07060.1

LOC_Os02g07060.1


Description : component beta-Tubulin of alpha-beta-Tubulin heterodimer


Gene families : OG0000156 (Archaeplastida) Phylogenetic Tree(s): OG0000156_tree ,
OG_05_0000074 (LandPlants) Phylogenetic Tree(s): OG_05_0000074_tree ,
OG_06_0000065 (SeedPlants) Phylogenetic Tree(s): OG_06_0000065_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g07060.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00251790 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
AMTR_s00009p00255970 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 Archaeplastida
AMTR_s00101p00135960 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
AT1G20010 TUB5 tubulin beta-5 chain 0.06 Archaeplastida
AT2G29550 TUB7 tubulin beta-7 chain 0.04 Archaeplastida
AT5G12250 TUB6 beta-6 tubulin 0.04 Archaeplastida
AT5G23860 TUB8 tubulin beta 8 0.03 Archaeplastida
AT5G62690 TUB2 tubulin beta chain 2 0.08 Archaeplastida
AT5G62700 TUB3 tubulin beta chain 3 0.08 Archaeplastida
Cpa|evm.model.tig00001067.6 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
GSVIVT01019758001 No alias Tubulin beta-4 chain OS=Eleusine indica 0.03 Archaeplastida
GSVIVT01021707001 No alias Tubulin beta chain (Fragment) OS=Glycine max 0.02 Archaeplastida
GSVIVT01025778001 No alias Tubulin beta-4 chain OS=Eleusine indica 0.04 Archaeplastida
GSVIVT01028941001 No alias Tubulin beta-8 chain OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_15590 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 Archaeplastida
Gb_18746 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Gb_22609 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Gb_25332 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Gb_28116 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Gb_29799 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Gb_30905 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
LOC_Os05g34170.2 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
MA_10431251g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
MA_230579g0010 No alias Tubulin beta-8 chain OS=Zea mays (sp|q41785|tbb8_maize : 281.0) 0.05 Archaeplastida
MA_230579g0020 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 Archaeplastida
MA_251404g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
MA_44957g0020 No alias Tubulin beta-3 chain OS=Triticum aestivum... 0.04 Archaeplastida
MA_55439g0010 No alias Tubulin beta-1 chain OS=Solanum tuberosum... 0.06 Archaeplastida
MA_7436374g0010 No alias Tubulin beta-6 chain OS=Zea mays (sp|q41783|tbb6_maize : 276.0) 0.03 Archaeplastida
MA_79708g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.07 Archaeplastida
MA_947959g0010 No alias No annotation 0.04 Archaeplastida
MA_9578301g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 Archaeplastida
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Mp2g09390.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Pp3c5_20690V3.1 No alias tubulin beta 8 0.02 Archaeplastida
Pp3c6_7500V3.1 No alias tubulin beta 8 0.03 Archaeplastida
Smo164404 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.06 Archaeplastida
Smo170592 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 Archaeplastida
Smo186992 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Smo23468 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 Archaeplastida
Smo402668 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Smo408201 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Solyc03g025730.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Solyc04g081490.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Solyc06g035970.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Solyc06g076640.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Solyc10g080940.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.09 Archaeplastida
Solyc10g086760.2.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.09 Archaeplastida
Zm00001e000048_P003 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Zm00001e005208_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e012336_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e017421_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e019525_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e025464_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Zm00001e028896_P004 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Zm00001e030351_P001 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!