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  5. LOC_Os02g07190.1

LOC_Os02g07190.1


Description : Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus (sp|c6l7u1|lin1_lotja : 219.0)


Gene families : OG0001418 (Archaeplastida) Phylogenetic Tree(s): OG0001418_tree ,
OG_05_0001365 (LandPlants) Phylogenetic Tree(s): OG_05_0001365_tree ,
OG_06_0011468 (SeedPlants) Phylogenetic Tree(s): OG_06_0011468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g07190.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00231470 evm_27.TU.AmTr_v1... Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus 0.03 Archaeplastida
GSVIVT01035145001 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus 0.02 Archaeplastida
MA_1171557g0010 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.03 Archaeplastida
MA_126120g0010 No alias Putative E3 ubiquitin-protein ligase LIN OS=Medicago... 0.03 Archaeplastida
MA_15009g0010 No alias Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus... 0.04 Archaeplastida
MA_394030g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7193588g0010 No alias No annotation 0.04 Archaeplastida
Solyc01g006380.2.1 No alias Putative E3 ubiquitin-protein ligase LIN OS=Medicago... 0.04 Archaeplastida
Solyc01g066740.3.1 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.04 Archaeplastida
Solyc07g020870.3.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.03 Archaeplastida
Zm00001e016398_P001 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.03 Archaeplastida
Zm00001e031427_P002 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!