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  5. LOC_Os02g08490.1

LOC_Os02g08490.1


Description : organellar chaperone (Clp-p|Clp-m)


Gene families : OG0000276 (Archaeplastida) Phylogenetic Tree(s): OG0000276_tree ,
OG_05_0002603 (LandPlants) Phylogenetic Tree(s): OG_05_0002603_tree ,
OG_06_0004579 (SeedPlants) Phylogenetic Tree(s): OG_06_0004579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g08490.1
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00179810 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.03 Archaeplastida
AMTR_s00086p00119290 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.06 Archaeplastida
AT1G74310 ATHSP101, HOT1, HSP101 heat shock protein 101 0.18 Archaeplastida
AT2G25140 CLPB4, CLPB-M, HSP98.7 casein lytic proteinase B4 0.16 Archaeplastida
AT5G15450 CLPB3, CLPB-P, APG6 casein lytic proteinase B3 0.05 Archaeplastida
Cpa|evm.model.tig00001416.4 No alias External stimuli response.temperature.Hsp... 0.01 Archaeplastida
Cpa|evm.model.tig00020996.22 No alias Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.03 Archaeplastida
Cre11.g467575 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre11.g467644 No alias External stimuli response.temperature.Hsp... 0.08 Archaeplastida
GSVIVT01007880001 No alias External stimuli response.temperature.Hsp... 0.13 Archaeplastida
GSVIVT01011496001 No alias External stimuli response.temperature.Hsp... 0.14 Archaeplastida
GSVIVT01035900001 No alias External stimuli response.temperature.Hsp... 0.16 Archaeplastida
Gb_21271 No alias cytosolic chaperone (Hsp101) 0.03 Archaeplastida
Gb_39383 No alias cytosolic chaperone (Hsp101) 0.07 Archaeplastida
MA_21130g0010 No alias Chaperone protein ClpB1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_229920g0010 No alias Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.02 Archaeplastida
Pp3c19_4790V3.1 No alias heat shock protein 101 0.09 Archaeplastida
Pp3c24_9060V3.1 No alias casein lytic proteinase B3 0.08 Archaeplastida
Smo170696 No alias External stimuli response.temperature.Hsp... 0.09 Archaeplastida
Smo174539 No alias External stimuli response.temperature.Hsp... 0.1 Archaeplastida
Smo411118 No alias External stimuli response.temperature.Hsp... 0.14 Archaeplastida
Smo418380 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
Solyc02g088610.4.1 No alias organellar chaperone (Clp-p|Clp-m) 0.1 Archaeplastida
Solyc03g115230.3.1 No alias cytosolic chaperone (Hsp101) 0.16 Archaeplastida
Solyc06g011380.2.1 No alias Chaperone protein ClpB4, mitochondrial OS=Arabidopsis... 0.11 Archaeplastida
Solyc06g011400.2.1 No alias Chaperone protein ClpB4, mitochondrial OS=Arabidopsis... 0.12 Archaeplastida
Zm00001e002026_P002 No alias organellar chaperone (Clp-p|Clp-m) 0.23 Archaeplastida
Zm00001e013843_P002 No alias organellar chaperone (Clp-p|Clp-m) 0.06 Archaeplastida
Zm00001e032223_P001 No alias cytosolic chaperone (Hsp101) 0.21 Archaeplastida
Zm00001e038056_P001 No alias organellar chaperone (Clp-p|Clp-m) 0.24 Archaeplastida
Zm00001e040778_P001 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 298 414
IPR003959 ATPase_AAA_core 694 863
IPR019489 Clp_ATPase_C 870 949
IPR004176 Clp_N 111 162
IPR004176 Clp_N 188 239
No external refs found!