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  5. LOC_Os02g08510.1

LOC_Os02g08510.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000387 (SeedPlants) Phylogenetic Tree(s): OG_06_0000387_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g08510.1
Cluster HCCA: Cluster_698

Target Alias Description ECC score Gene Family Method Actions
AT1G10480 ZFP5 zinc finger protein 5 0.02 Archaeplastida
AT1G24625 ZFP7 zinc finger protein 7 0.06 Archaeplastida
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Gb_25685 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Gb_27734 No alias Zinc finger protein 10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g57550.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
LOC_Os04g50070.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Pp3c20_10790V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.01 Archaeplastida
Pp3c23_800V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.01 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g011120.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc11g011890.2.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e008019_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e013845_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034219_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e034220_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e034221_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e035448_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e037944_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!