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  5. LOC_Os02g09070.1

LOC_Os02g09070.1


Description : transcription factor (PLATZ)


Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0000880 (LandPlants) Phylogenetic Tree(s): OG_05_0000880_tree ,
OG_06_0001431 (SeedPlants) Phylogenetic Tree(s): OG_06_0001431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g09070.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00211460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
AMTR_s00032p00241350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
AMTR_s00033p00166000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.09 Archaeplastida
AT2G12646 No alias PLATZ transcription factor family protein 0.08 Archaeplastida
Cre02.g095950 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.01 Archaeplastida
GSVIVT01001279001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
GSVIVT01012050001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
GSVIVT01027645001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
GSVIVT01031446001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
MA_10310g0010 No alias transcription factor (PLATZ) 0.02 Archaeplastida
MA_8773709g0010 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Solyc07g007320.3.1 No alias no hits & (original description: none) 0.13 Archaeplastida
Solyc12g010470.3.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e013748_P001 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Zm00001e013865_P001 No alias transcription factor (PLATZ) 0.24 Archaeplastida
Zm00001e041404_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR006734 DUF597 58 129
No external refs found!