AMTR_s00002p00264880 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.490

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000087 (LandPlants) Phylogenetic Tree(s): OG_05_0000087_tree ,
OG_06_0000067 (SeedPlants) Phylogenetic Tree(s): OG_06_0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00002p00264880
Cluster	HCCA: Cluster_237

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00249020	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00065p00201230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
AT1G13960	WRKY4	WRKY DNA-binding protein 4	0.03	Archaeplastida
AT1G66600	ABO3, WRKY63, ATWRKY63	ABA overly sensitive mutant 3	0.03	Archaeplastida
AT1G80590	WRKY66, ATWRKY66	WRKY DNA-binding protein 66	0.02	Archaeplastida
AT2G23320	WRKY15	WRKY DNA-binding protein 15	0.02	Archaeplastida
AT2G30250	ATWRKY25, WRKY25	WRKY DNA-binding protein 25	0.03	Archaeplastida
AT4G23810	WRKY53, ATWRKY53	WRKY family transcription factor	0.02	Archaeplastida
AT5G01900	WRKY62, ATWRKY62	WRKY DNA-binding protein 62	0.02	Archaeplastida
AT5G46350	WRKY8, ATWRKY8	WRKY DNA-binding protein 8	0.02	Archaeplastida
AT5G64810	ATWRKY51, WRKY51	WRKY DNA-binding protein 51	0.02	Archaeplastida
Gb_01873	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g47560.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os08g29660.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_7893884g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp1g08960.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp2g20960.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Mp6g16800.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp7g06550.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp7g17200.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Pp3c4_26880V3.1	No alias	WRKY DNA-binding protein 57	0.03	Archaeplastida
Smo56793	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Solyc01g089960.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc01g104550.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc04g078550.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc05g053380.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc06g066370.4.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
Solyc06g068460.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc08g006320.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc08g008280.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc09g014990.4.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.04	Archaeplastida
Zm00001e006014_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e007023_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e008447_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e015531_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e016343_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e019827_P003	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e020410_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e027140_P002	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.02	Archaeplastida
Zm00001e027460_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027702_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e028011_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e038062_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e041561_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0006541	glutamine metabolic process	IEP	Neighborhood
BP	GO:0006542	glutamine biosynthetic process	IEP	Neighborhood
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0016211	ammonia ligase activity	IEP	Neighborhood
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	239	296
IPR018872	Zn-cluster-dom	190	235

External Links

No external refs found!

AMTR_s00002p00264880 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation