LOC_Os02g10940.1


Description : no hits & (original description: none)


Gene families : OG0007958 (Archaeplastida) Phylogenetic Tree(s): OG0007958_tree ,
OG_05_0006370 (LandPlants) Phylogenetic Tree(s): OG_05_0006370_tree ,
OG_06_0004826 (SeedPlants) Phylogenetic Tree(s): OG_06_0004826_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g10940.1
Cluster HCCA: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
AT5G65520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
Zm00001e013994_P001 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0000930 gamma-tubulin complex IEP Neighborhood
CC GO:0000931 gamma-tubulin large complex IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
CC GO:0008274 gamma-tubulin ring complex IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031503 protein-containing complex localization IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0033566 gamma-tubulin complex localization IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034629 cellular protein-containing complex localization IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044450 microtubule organizing center part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013105 TPR_2 187 219
No external refs found!