LOC_Os02g13310.1


Description : transcription factor (BEL)


Gene families : OG0000236 (Archaeplastida) Phylogenetic Tree(s): OG0000236_tree ,
OG_05_0000141 (LandPlants) Phylogenetic Tree(s): OG_05_0000141_tree ,
OG_06_0010975 (SeedPlants) Phylogenetic Tree(s): OG_06_0010975_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g13310.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00262320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00030p00173920 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00059p00164750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT1G75430 BLH11 BEL1-like homeodomain 11 0.05 Archaeplastida
AT2G16400 BLH7 BEL1-like homeodomain 7 0.03 Archaeplastida
AT2G27990 BLH8, PNF BEL1-like homeodomain 8 0.05 Archaeplastida
AT4G32980 ATH1 homeobox gene 1 0.04 Archaeplastida
AT4G34610 BLH6 BEL1-like homeodomain 6 0.02 Archaeplastida
AT5G02030 VAN, BLH9, RPL,... POX (plant homeobox) family protein 0.04 Archaeplastida
Cpa|evm.model.tig00020927.63 No alias RNA biosynthesis.transcriptional activation.HB... 0.01 Archaeplastida
GSVIVT01009779001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
GSVIVT01035361001 No alias RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
LOC_Os01g62920.1 No alias transcription factor (BEL) 0.05 Archaeplastida
LOC_Os03g47730.1 No alias transcription factor (BEL) 0.04 Archaeplastida
MA_76835g0010 No alias transcription factor (BEL) 0.04 Archaeplastida
Mp5g11060.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp8g18310.1 No alias transcription factor (BEL) 0.03 Archaeplastida
Pp3c13_7150V3.1 No alias BEL1-like homeodomain 6 0.02 Archaeplastida
Pp3c15_11880V3.1 No alias BEL1-like homeodomain 7 0.03 Archaeplastida
Pp3c9_6780V3.1 No alias BEL1-like homeodomain 7 0.03 Archaeplastida
Smo68227 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Smo80869 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Solyc02g065490.4.1 No alias transcription factor (BEL) 0.02 Archaeplastida
Solyc08g065420.3.1 No alias transcription factor (BEL) 0.04 Archaeplastida
Solyc09g011380.3.1 No alias transcription factor (BEL) 0.04 Archaeplastida
Solyc10g086640.3.1 No alias transcription factor (BEL) 0.04 Archaeplastida
Solyc11g069890.3.1 No alias transcription factor (BEL) 0.06 Archaeplastida
Zm00001e000495_P001 No alias transcription factor (BEL) 0.06 Archaeplastida
Zm00001e014436_P001 No alias transcription factor (BEL) 0.04 Archaeplastida
Zm00001e019280_P001 No alias transcription factor (BEL) 0.07 Archaeplastida
Zm00001e026923_P002 No alias transcription factor (BEL) 0.06 Archaeplastida
Zm00001e031812_P001 No alias transcription factor (BEL) 0.08 Archaeplastida
Zm00001e037180_P001 No alias transcription factor (BEL) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR006563 POX_dom 241 391
IPR008422 Homeobox_KN_domain 462 501
No external refs found!