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Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.509
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component
Gene families : OG0006379 (Archaeplastida) Phylogenetic Tree(s): OG0006379_tree ,
OG_05_0005478 (LandPlants) Phylogenetic Tree(s): OG_05_0005478_tree ,
OG_06_0004461 (SeedPlants) Phylogenetic Tree(s): OG_06_0004461_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00002p00266430 | |
| Cluster | HCCA: Cluster_96 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Zm00001e003175_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e018050_P001 | No alias | component FBX of SCF E3 ubiquitin ligase complex | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
| MF | GO:0005048 | signal sequence binding | IEP | Neighborhood |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0006260 | DNA replication | IEP | Neighborhood |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Neighborhood |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009147 | pyrimidine nucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009200 | deoxyribonucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009211 | pyrimidine deoxyribonucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009219 | pyrimidine deoxyribonucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009394 | 2'-deoxyribonucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0019692 | deoxyribose phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Neighborhood |
| MF | GO:0042277 | peptide binding | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0045185 | maintenance of protein location | IEP | Neighborhood |
| BP | GO:0046080 | dUTP metabolic process | IEP | Neighborhood |
| MF | GO:0046923 | ER retention sequence binding | IEP | Neighborhood |
| BP | GO:0051235 | maintenance of location | IEP | Neighborhood |
| BP | GO:0051651 | maintenance of location in cell | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001810 | F-box_dom | 124 | 155 |
| No external refs found! |