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  5. LOC_Os02g13890.1

LOC_Os02g13890.1


Description : no hits & (original description: none)


Gene families : OG0001741 (Archaeplastida) Phylogenetic Tree(s): OG0001741_tree ,
OG_05_0007336 (LandPlants) Phylogenetic Tree(s): OG_05_0007336_tree ,
OG_06_0004415 (SeedPlants) Phylogenetic Tree(s): OG_06_0004415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g13890.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Gb_38623 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g35910.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c21_290V3.1 No alias RING/FYVE/PHD-type zinc finger family protein 0.05 Archaeplastida
Zm00001e035554_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 219 283
IPR007461 Ysc84_actin-binding 401 525
No external refs found!