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LOC_Os02g13960.1


Description : U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica (sp|q6euk7|pub04_orysj : 1194.0)


Gene families : OG0000227 (Archaeplastida) Phylogenetic Tree(s): OG0000227_tree ,
OG_05_0000690 (LandPlants) Phylogenetic Tree(s): OG_05_0000690_tree ,
OG_06_0011588 (SeedPlants) Phylogenetic Tree(s): OG_06_0011588_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g13960.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00171260 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s03795p00007310 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT5G01830 No alias ARM repeat superfamily protein 0.05 Archaeplastida
GSVIVT01016225001 No alias U-box domain-containing protein 14 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01024985001 No alias U-box domain-containing protein 13 OS=Arabidopsis thaliana 0.07 Archaeplastida
Gb_10627 No alias U-box domain-containing protein 13 OS=Arabidopsis... 0.03 Archaeplastida
Gb_29276 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
MA_84321g0010 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Mp5g12560.1 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Pp3c20_16680V3.1 No alias plant U-box 13 0.02 Archaeplastida
Smo75609 No alias U-box domain-containing protein 1 OS=Medicago truncatula 0.03 Archaeplastida
Solyc02g072080.1.1 No alias U-box domain-containing protein 17 OS=Arabidopsis... 0.02 Archaeplastida
Solyc04g082440.4.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.03 Archaeplastida
Solyc09g018230.1.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e014566_P002 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e028839_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e031915_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e036734_P001 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000225 Armadillo 432 469
IPR003613 Ubox_domain 297 364
No external refs found!