1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g17940.1

LOC_Os02g17940.1


Description : Protein SRG1 OS=Arabidopsis thaliana (sp|q39224|srg1_arath : 244.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 160.9)


Gene families : OG0000036 (Archaeplastida) Phylogenetic Tree(s): OG0000036_tree ,
OG_05_0001434 (LandPlants) Phylogenetic Tree(s): OG_05_0001434_tree ,
OG_06_0000751 (SeedPlants) Phylogenetic Tree(s): OG_06_0000751_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g17940.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00217060 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 Archaeplastida
GSVIVT01013263001 No alias S-norcoclaurine synthase 1 OS=Coptis japonica 0.06 Archaeplastida
MA_678151g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_922824g0010 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.02 Archaeplastida
MA_958517g0010 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.02 Archaeplastida
MA_9844312g0010 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.06 Archaeplastida
Mp3g11090.1 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.01 Archaeplastida
Mp3g19700.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.01 Archaeplastida
Mp6g01210.1 No alias no description available(sp|w5qjz5|diox4_rutgr : 146.0)... 0.02 Archaeplastida
Pp3c25_4690V3.1 No alias gibberellin 20-oxidase 3 0.01 Archaeplastida
Solyc02g071440.3.1 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g080120.3.1 No alias Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 207 300
IPR026992 DIOX_N 48 157
No external refs found!