LOC_Os02g18410.1


Description : Plasma membrane-associated cation-binding protein 1 OS=Arabidopsis thaliana (sp|q96262|pcap1_arath : 100.0)


Gene families : OG0004028 (Archaeplastida) Phylogenetic Tree(s): OG0004028_tree ,
OG_05_0002800 (LandPlants) Phylogenetic Tree(s): OG_05_0002800_tree ,
OG_06_0003282 (SeedPlants) Phylogenetic Tree(s): OG_06_0003282_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g18410.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AT4G20260 PCAP1, ATPCAP1 plasma-membrane associated cation-binding protein 1 0.05 Archaeplastida
GSVIVT01001340001 No alias Plasma membrane-associated cation-binding protein 1... 0.04 Archaeplastida
Gb_32620 No alias Plasma membrane-associated cation-binding protein 1... 0.04 Archaeplastida
MA_15276g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_209808g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_30683g0010 No alias Plasma membrane-associated cation-binding protein 1... 0.04 Archaeplastida
Mp4g05850.1 No alias Plasma membrane-associated cation-binding protein 1... 0.03 Archaeplastida
Zm00001e014131_P002 No alias Plasma membrane-associated cation-binding protein 1... 0.15 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0046658 anchored component of plasma membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR008469 DREPP 1 215
No external refs found!