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  5. LOC_Os02g18530.1

LOC_Os02g18530.1


Description : no hits & (original description: none)


Gene families : OG0001964 (Archaeplastida) Phylogenetic Tree(s): OG0001964_tree ,
OG_05_0001282 (LandPlants) Phylogenetic Tree(s): OG_05_0001282_tree ,
OG_06_0000665 (SeedPlants) Phylogenetic Tree(s): OG_06_0000665_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g18530.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.78 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g26760.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g32050.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g25560.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os05g14480.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g02040.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 301 403
No external refs found!