Description : component RPS3a of SSU proteome
Gene families : OG0001983 (Archaeplastida) Phylogenetic Tree(s): OG0001983_tree ,
OG_05_0001683 (LandPlants) Phylogenetic Tree(s): OG_05_0001683_tree ,
OG_06_0002405 (SeedPlants) Phylogenetic Tree(s): OG_06_0002405_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os02g18550.1 | |
Cluster | HCCA: Cluster_140 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00271660 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | Archaeplastida | |
AMTR_s00026p00042160 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | Archaeplastida | |
AT3G04840 | No alias | Ribosomal protein S3Ae | 0.2 | Archaeplastida | |
AT4G34670 | No alias | Ribosomal protein S3Ae | 0.21 | Archaeplastida | |
Cpa|evm.model.tig00020710.39 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.09 | Archaeplastida | |
Cre13.g568650 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | Archaeplastida | |
GSVIVT01018024001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | Archaeplastida | |
GSVIVT01021836001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | Archaeplastida | |
Gb_02289 | No alias | component RPS3a of SSU proteome | 0.07 | Archaeplastida | |
LOC_Os12g21798.1 | No alias | component RPS3a of SSU proteome | 0.08 | Archaeplastida | |
MA_124901g0010 | No alias | component RPS3a of SSU proteome | 0.06 | Archaeplastida | |
MA_31004g0010 | No alias | component RPS3a of SSU proteome | 0.16 | Archaeplastida | |
Mp6g02810.1 | No alias | component RPS3a of SSU proteome | 0.17 | Archaeplastida | |
Pp3c11_17260V3.1 | No alias | Ribosomal protein S3Ae | 0.08 | Archaeplastida | |
Pp3c12_18590V3.1 | No alias | Ribosomal protein S3Ae | 0.05 | Archaeplastida | |
Pp3c18_2090V3.1 | No alias | Ribosomal protein S3Ae | 0.14 | Archaeplastida | |
Pp3c21_21510V3.1 | No alias | Ribosomal protein S3Ae | 0.16 | Archaeplastida | |
Pp3c22_18300V3.1 | No alias | Ribosomal protein S3Ae | 0.13 | Archaeplastida | |
Pp3c4_14160V3.1 | No alias | Ribosomal protein S3Ae | 0.09 | Archaeplastida | |
Smo160008 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | Archaeplastida | |
Smo271906 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | Archaeplastida | |
Smo271907 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | Archaeplastida | |
Solyc03g097900.3.1 | No alias | component RPS3a of SSU proteome | 0.16 | Archaeplastida | |
Solyc06g072490.3.1 | No alias | component RPS3a of SSU proteome | 0.18 | Archaeplastida | |
Zm00001e000767_P001 | No alias | No annotation | 0.05 | Archaeplastida | |
Zm00001e038777_P001 | No alias | component RPS3a of SSU proteome | 0.13 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | Neighborhood |
CC | GO:0000178 | exosome (RNase complex) | IEP | Neighborhood |
CC | GO:0000313 | organellar ribosome | IEP | Neighborhood |
MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005525 | GTP binding | IEP | Neighborhood |
CC | GO:0005730 | nucleolus | IEP | Neighborhood |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Neighborhood |
CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
CC | GO:0005761 | mitochondrial ribosome | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
BP | GO:0006547 | histidine metabolic process | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
CC | GO:0019867 | outer membrane | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
CC | GO:0031090 | organelle membrane | IEP | Neighborhood |
CC | GO:0031966 | mitochondrial membrane | IEP | Neighborhood |
CC | GO:0031968 | organelle outer membrane | IEP | Neighborhood |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
CC | GO:0032299 | ribonuclease H2 complex | IEP | Neighborhood |
MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Neighborhood |
CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
CC | GO:0098588 | bounding membrane of organelle | IEP | Neighborhood |
CC | GO:0098798 | mitochondrial protein complex | IEP | Neighborhood |
CC | GO:0098805 | whole membrane | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
CC | GO:1905354 | exoribonuclease complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001593 | Ribosomal_S3Ae | 15 | 221 |
No external refs found! |