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  5. AMTR_s00002p00269120

AMTR_s00002p00269120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.547

No description available


Gene families : OG0000196 (Archaeplastida) Phylogenetic Tree(s): OG0000196_tree ,
OG_05_0000095 (LandPlants) Phylogenetic Tree(s): OG_05_0000095_tree ,
OG_06_0002130 (SeedPlants) Phylogenetic Tree(s): OG_06_0002130_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00269120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00106p00113330 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G77145 No alias Protein of unknown function (DUF506) 0.02 Archaeplastida
AT2G39650 No alias Protein of unknown function (DUF506) 0.05 Archaeplastida
GSVIVT01020560001 No alias No description available 0.03 Archaeplastida
GSVIVT01026527001 No alias No description available 0.04 Archaeplastida
Gb_09444 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_28132 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_36122 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_37300 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g25020.1 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_7278026g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc06g005480.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e018858_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019800_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 93 321
No external refs found!