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  5. LOC_Os02g19220.1

LOC_Os02g19220.1


Description : mRNA decay factor (PAT1)


Gene families : OG0002447 (Archaeplastida) Phylogenetic Tree(s): OG0002447_tree ,
OG_05_0002022 (LandPlants) Phylogenetic Tree(s): OG_05_0002022_tree ,
OG_06_0001683 (SeedPlants) Phylogenetic Tree(s): OG_06_0001683_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g19220.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278203 No alias No description available 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR019167 Topo_II-assoc_PAT1 486 624
No external refs found!