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  5. LOC_Os02g19990.1

LOC_Os02g19990.1


Description : Reticulon-like protein B17 OS=Arabidopsis thaliana (sp|q6dr04|rtnlq_arath : 205.0)


Gene families : OG0003270 (Archaeplastida) Phylogenetic Tree(s): OG0003270_tree ,
OG_05_0002482 (LandPlants) Phylogenetic Tree(s): OG_05_0002482_tree ,
OG_06_0002417 (SeedPlants) Phylogenetic Tree(s): OG_06_0002417_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g19990.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00213680 evm_27.TU.AmTr_v1... Reticulon-like protein B18 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00065p00202980 evm_27.TU.AmTr_v1... Reticulon-like protein B21 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT4G28430 No alias Reticulon family protein 0.05 Archaeplastida
GSVIVT01020595001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_25024 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_22853g0010 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp1g14200.1 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Smo405772 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Zm00001e024730_P001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003388 Reticulon 218 372
No external refs found!