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  5. LOC_Os02g20070.1

LOC_Os02g20070.1


Description : no hits & (original description: none)


Gene families : OG0000098 (Archaeplastida) Phylogenetic Tree(s): OG0000098_tree ,
OG_05_0000033 (LandPlants) Phylogenetic Tree(s): OG_05_0000033_tree ,
OG_06_0000010 (SeedPlants) Phylogenetic Tree(s): OG_06_0000010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g20070.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g15190.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g19660.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g29370.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g35080.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g66450.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g27630.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g37240.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os03g52550.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os04g01190.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g02200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g05310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g05680.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g19910.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g21150.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os05g04430.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g05010.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g15960.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os05g17040.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g17970.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os05g18910.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os05g20370.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g20820.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g31430.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os06g22790.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g29060.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g13690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g14970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g27690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g31980.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os07g45710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g13560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g13610.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os08g27300.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os09g07250.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g07690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g07950.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os09g11030.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os10g12280.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os10g16690.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g17230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g24770.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os10g31600.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os11g07720.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g22020.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g22710.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g23090.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g24920.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g28790.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g33060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g35690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g05500.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g16820.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g27700.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g28200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g28340.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!