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  5. AMTR_s00002p00269730

AMTR_s00002p00269730 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.557

Description : Calmodulin-like protein 8 OS=Arabidopsis thaliana


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000412 (LandPlants) Phylogenetic Tree(s): OG_05_0000412_tree ,
OG_06_0000454 (SeedPlants) Phylogenetic Tree(s): OG_06_0000454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00269730
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT2G41090 No alias Calcium-binding EF-hand family protein 0.03 Archaeplastida
AT4G20780 CML42 calmodulin like 42 0.02 Archaeplastida
Gb_09082 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_13868 No alias Probable calcium-binding protein CML43 OS=Arabidopsis... 0.03 Archaeplastida
Gb_37768 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g59530.1 No alias Calmodulin-like protein 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os01g72080.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g24780.1 No alias Probable calcium-binding protein CML21 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os12g04360.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os12g41110.1 No alias Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_103558g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_1190858g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_27386g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 Archaeplastida
MA_66990g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g063350.1.1 No alias Probable calcium-binding protein CML18 OS=Oryza sativa... 0.02 Archaeplastida
Solyc03g005240.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Solyc06g083000.1.1 No alias Calmodulin-like protein 7 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 86 146
IPR011992 EF-hand-dom_pair 14 73
No external refs found!