LOC_Os02g21980.1


Description : no hits & (original description: none)


Gene families : OG0001754 (Archaeplastida) Phylogenetic Tree(s): OG0001754_tree ,
OG_05_0001129 (LandPlants) Phylogenetic Tree(s): OG_05_0001129_tree ,
OG_06_0000591 (SeedPlants) Phylogenetic Tree(s): OG_06_0000591_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g21980.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g31010.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g31040.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g31542.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os03g45734.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g56040.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g16459.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g17789.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g08660.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os05g36040.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g27990.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g21190.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g21410.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g28720.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g30050.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g12710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g31860.1 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 78 167
No external refs found!