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  5. LOC_Os02g25910.1

LOC_Os02g25910.1


Description : histone (H3)


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0080848 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0069714 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g25910.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT5G10390 No alias Histone superfamily protein 0.02 Archaeplastida
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g265500 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre16.g649900 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.02 Archaeplastida
Gb_27618 No alias histone (H3) 0.02 Archaeplastida
Gb_29026 No alias histone (H3) 0.03 Archaeplastida
Gb_30564 No alias histone (H3) 0.03 Archaeplastida
Gb_36661 No alias histone (H3) 0.02 Archaeplastida
Gb_40804 No alias histone (H3) 0.02 Archaeplastida
LOC_Os05g36280.1 No alias histone (H3) 0.02 Archaeplastida
MA_10432805g0020 No alias histone (H3) 0.03 Archaeplastida
MA_113838g0010 No alias histone (H3) 0.02 Archaeplastida
MA_197719g0010 No alias histone (H3) 0.02 Archaeplastida
MA_24261g0010 No alias histone (H3) 0.03 Archaeplastida
MA_356208g0010 No alias histone (H3) 0.02 Archaeplastida
MA_475294g0010 No alias histone (H3) 0.02 Archaeplastida
MA_561217g0010 No alias histone (H3) 0.02 Archaeplastida
MA_74555g0010 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) 0.03 Archaeplastida
MA_871602g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp3g09090.1 No alias histone (H3) 0.02 Archaeplastida
Mp7g10730.1 No alias histone (H3) 0.02 Archaeplastida
Pp3c18_14481V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c1_20670V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c23_15100V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Smo103546 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Solyc01g074000.3.1 No alias histone (H3) 0.02 Archaeplastida
Solyc02g077480.1.1 No alias histone (H3) 0.02 Archaeplastida
Solyc10g008910.1.1 No alias histone (H3) 0.02 Archaeplastida
Solyc12g056540.1.1 No alias histone (H3) 0.03 Archaeplastida
Zm00001e008155_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e008160_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e016861_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e019170_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e040856_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e040876_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0010011 auxin binding IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 66 207
No external refs found!