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  5. AMTR_s00002p00270470

AMTR_s00002p00270470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.585

Description : Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein


Gene families : OG0000534 (Archaeplastida) Phylogenetic Tree(s): OG0000534_tree ,
OG_05_0000431 (LandPlants) Phylogenetic Tree(s): OG_05_0000431_tree ,
OG_06_0001530 (SeedPlants) Phylogenetic Tree(s): OG_06_0001530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00270470
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g16560.1 No alias ELIP LHC-related protein 0.03 Archaeplastida
Mp3g12510.1 No alias ELIP LHC-related protein 0.02 Archaeplastida
Mp3g12520.1 No alias ELIP LHC-related protein 0.02 Archaeplastida
Mp3g12530.1 No alias ELIP LHC-related protein 0.02 Archaeplastida
Mp3g12540.1 No alias ELIP LHC-related protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 150 182
IPR022796 Chloroa_b-bind 161 184
IPR022796 Chloroa_b-bind 92 132
No external refs found!