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  5. LOC_Os02g26600.1

LOC_Os02g26600.1


Description : SMXL strigolactone signal transducer


Gene families : OG0001002 (Archaeplastida) Phylogenetic Tree(s): OG0001002_tree ,
OG_05_0000604 (LandPlants) Phylogenetic Tree(s): OG_05_0000604_tree ,
OG_06_0000858 (SeedPlants) Phylogenetic Tree(s): OG_06_0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g26600.1
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00252890 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.04 Archaeplastida
AMTR_s00030p00222400 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.06 Archaeplastida
AT3G52490 No alias Double Clp-N motif-containing P-loop nucleoside... 0.03 Archaeplastida
AT4G29920 No alias Double Clp-N motif-containing P-loop nucleoside... 0.04 Archaeplastida
AT5G57130 No alias Clp amino terminal domain-containing protein 0.1 Archaeplastida
GSVIVT01029304001 No alias Phytohormones.strigolactone.perception and signal... 0.07 Archaeplastida
GSVIVT01034648001 No alias Phytohormones.strigolactone.perception and signal... 0.05 Archaeplastida
Gb_09621 No alias SMXL strigolactone signal transducer 0.03 Archaeplastida
LOC_Os04g23220.1 No alias Protein SMAX1-LIKE 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_193999g0010 No alias SMXL strigolactone signal transducer 0.04 Archaeplastida
Solyc01g007260.3.1 No alias SMXL strigolactone signal transducer 0.03 Archaeplastida
Solyc07g018070.4.1 No alias Protein SMAX1-LIKE 4 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc11g006650.3.1 No alias SMXL strigolactone signal transducer 0.04 Archaeplastida
Zm00001e008174_P001 No alias SMXL strigolactone signal transducer 0.09 Archaeplastida
Zm00001e008462_P001 No alias SMXL strigolactone signal transducer 0.13 Archaeplastida
Zm00001e014536_P001 No alias Protein SMAX1-LIKE 5 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Zm00001e014748_P001 No alias SMXL strigolactone signal transducer 0.05 Archaeplastida
Zm00001e024175_P002 No alias SMXL strigolactone signal transducer 0.03 Archaeplastida
Zm00001e040671_P002 No alias SMXL strigolactone signal transducer 0.06 Archaeplastida
Zm00001e040845_P001 No alias SMXL strigolactone signal transducer 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004176 Clp_N 190 224
IPR004176 Clp_N 23 50
No external refs found!