1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g27110.1

LOC_Os02g27110.1


Description : no hits & (original description: none)


Gene families : OG0000529 (Archaeplastida) Phylogenetic Tree(s): OG0000529_tree ,
OG_05_0000912 (LandPlants) Phylogenetic Tree(s): OG_05_0000912_tree ,
OG_06_0002634 (SeedPlants) Phylogenetic Tree(s): OG_06_0002634_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g27110.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00035310 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00089p00157190 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00089p00157880 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00089p00172750 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.07 Archaeplastida
Cpa|evm.model.tig00000551.1 No alias No description available 0.01 Archaeplastida
Cpa|evm.model.tig00000615.84 No alias No description available 0.03 Archaeplastida
GSVIVT01013268001 No alias No description available 0.04 Archaeplastida
GSVIVT01013270001 No alias No description available 0.03 Archaeplastida
GSVIVT01017643001 No alias No description available 0.03 Archaeplastida
GSVIVT01019371001 No alias No description available 0.04 Archaeplastida
Gb_15429 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_35998 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10343795g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10426328g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10428265g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10432463g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_119498g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_295252g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_36612g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_58863g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_901094g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c18_1376V3.1 No alias pleckstrin homology (PH) domain-containing protein 0.04 Archaeplastida
Solyc09g009350.2.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc09g009370.4.1 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000008 C2_dom 1519 1625
IPR009291 Vps62 1159 1298
IPR009543 SHR-BD 2144 2442
IPR031645 VPS13_C 2692 2835
No external refs found!