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  5. LOC_Os02g27130.1

LOC_Os02g27130.1


Description : no hits & (original description: none)


Gene families : OG0000529 (Archaeplastida) Phylogenetic Tree(s): OG0000529_tree ,
OG_05_0000912 (LandPlants) Phylogenetic Tree(s): OG_05_0000912_tree ,
OG_06_0002634 (SeedPlants) Phylogenetic Tree(s): OG_06_0002634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g27130.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00035310 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00058p00142360 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00089p00157880 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00089p00172750 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000042.91 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00000459.51 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00000615.50 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00020554.153 No alias No description available 0.01 Archaeplastida
GSVIVT01013268001 No alias No description available 0.04 Archaeplastida
GSVIVT01019371001 No alias No description available 0.04 Archaeplastida
Gb_15429 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10426328g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10428265g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10432463g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10436895g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_119498g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_267190g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_295252g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_36612g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_901094g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp3g08780.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g07580.2 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c9_20320V3.1 No alias calcium-dependent lipid-binding family protein 0.02 Archaeplastida
Smo440026 No alias No description available 0.03 Archaeplastida
Smo444980 No alias No description available 0.02 Archaeplastida
Solyc09g009350.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g009370.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR031642 VPS13_mid_rpt 742 962
IPR026854 VPS13_N 95 205
IPR031646 VPS13_N2 215 430
No external refs found!