LOC_Os02g30800.1


Description : catalytic component POL2/POLE1 of DNA polymerase epsilon complex


Gene families : OG0003279 (Archaeplastida) Phylogenetic Tree(s): OG0003279_tree ,
OG_05_0003575 (LandPlants) Phylogenetic Tree(s): OG_05_0003575_tree ,
OG_06_0002633 (SeedPlants) Phylogenetic Tree(s): OG_06_0002633_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g30800.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00175760 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.elongation.DNA... 0.08 Archaeplastida
AMTR_s00040p00177210 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.elongation.DNA... 0.11 Archaeplastida
AT1G08260 TIL1, POL2A,... DNA polymerase epsilon catalytic subunit 0.05 Archaeplastida
Cpa|evm.model.tig00000970.30 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.03 Archaeplastida
Cpa|evm.model.tig00000970.31 No alias DNA polymerase epsilon catalytic subunit A... 0.03 Archaeplastida
Cre03.g179961 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.11 Archaeplastida
Gb_06608 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.07 Archaeplastida
MA_10433902g0010 No alias DNA polymerase epsilon catalytic subunit A... 0.08 Archaeplastida
MA_80165g0010 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.1 Archaeplastida
MA_88369g0010 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.11 Archaeplastida
Mp3g08150.1 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.11 Archaeplastida
Pp3c13_4500V3.1 No alias DNA polymerase epsilon catalytic subunit 0.02 Archaeplastida
Smo442263 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.04 Archaeplastida
Solyc11g067140.2.1 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.04 Archaeplastida
Zm00001e014636_P002 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
CC GO:0031262 Ndc80 complex IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR013697 DNA_pol_e_suA_C 1588 1960
IPR006134 DNA-dir_DNA_pol_B_multi_dom 840 1136
IPR006133 DNA-dir_DNA_pol_B_exonuc 93 481
No external refs found!