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  5. LOC_Os02g31030.2

LOC_Os02g31030.2


Description : Glycerophosphodiester phosphodiesterase GDPD2 OS=Arabidopsis thaliana (sp|q9flm1|gdpd2_arath : 401.0)


Gene families : OG0002197 (Archaeplastida) Phylogenetic Tree(s): OG0002197_tree ,
OG_05_0002845 (LandPlants) Phylogenetic Tree(s): OG_05_0002845_tree ,
OG_06_0003540 (SeedPlants) Phylogenetic Tree(s): OG_06_0003540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g31030.2
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Gb_23497 No alias Glycerophosphodiester phosphodiesterase GDPD1,... 0.04 Archaeplastida
LOC_Os04g32320.1 No alias Glycerophosphodiester phosphodiesterase GDPD2... 0.07 Archaeplastida
Zm00001e014641_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0008081 phosphoric diester hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 59 335
No external refs found!