LOC_Os02g32040.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g32040.1
Cluster	HCCA: Cluster_186

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00147970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00010p00240320	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor FZP OS=Oryza...	0.02	Archaeplastida
AMTR_s00016p00092590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00025p00218200	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor ERF015...	0.03	Archaeplastida
AMTR_s00040p00196580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00089p00102760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00095p00094910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G21910	DREB26	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G22810	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G28160	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G63030	ddf2	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT2G36450	HRD	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G23220	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G25890	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT3G60490	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G11190	SHN3	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.05	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT5G18560	PUCHI	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G19790	RAP2.11	related to AP2 11	0.05	Archaeplastida
AT5G25810	tny	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.03	Archaeplastida
AT5G51190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
GSVIVT01001089001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01002195001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013924001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01017315001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
GSVIVT01018270001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01018271001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01021146001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01028314001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01033793001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_01221	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_03368	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_11856	No alias	Ethylene-responsive transcription factor RAP2-3...	0.02	Archaeplastida
Gb_12588	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_23870	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_29220	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_29359	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.05	Archaeplastida
LOC_Os02g43970.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os02g45420.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os05g34730.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.05	Archaeplastida
LOC_Os07g47330.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_10031781g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10266433g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_132427g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_135279g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_179692g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_180106g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_32651g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_42369g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_4481564g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_4929994g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
MA_5730259g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_891091g0010	No alias	Ethylene-responsive transcription factor 1A...	0.02	Archaeplastida
MA_912855g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_938274g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_957g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9588449g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9786598g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
Pp3c10_7030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_13260V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c4_23930V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c4_31920V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c8_7340V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo104980	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.03	Archaeplastida
Solyc03g005500.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.02	Archaeplastida
Solyc04g072300.1.1	No alias	Ethylene-responsive transcription factor FZP OS=Oryza...	0.03	Archaeplastida
Solyc05g050790.3.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc06g065820.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g068360.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g068830.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc08g066660.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e003061_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Zm00001e003579_P001	No alias	Ethylene-responsive transcription factor ERF015...	0.03	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e007352_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e010609_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Zm00001e019026_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e023157_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e023159_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e027350_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e036130_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e036201_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.02	Archaeplastida
Zm00001e040124_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e041288_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
CC	GO:0005875	microtubule associated complex	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
CC	GO:0030286	dynein complex	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	39	88

External Links

No external refs found!

LOC_Os02g32040.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation