LOC_Os02g34260.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g34260.1
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00099690	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor ERF110...	0.02	Archaeplastida
AMTR_s00077p00141890	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G63030	ddf2	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G75490	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G47520	HRE2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G18450	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G44210	ATERF-9, ERF9, ATERF9	erf domain protein 9	0.02	Archaeplastida
Cre16.g649433	No alias	No description available	0.02	Archaeplastida
GSVIVT01009801001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.07	Archaeplastida
Gb_11794	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_32806	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_35633	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_113446g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_166248g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_484878g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
Mp1g20040.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp7g09350.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Pp3c19_6370V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c22_1800V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Solyc02g090790.1.1	No alias	transcription factor (ERF)	0.08	Archaeplastida
Solyc03g093540.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc03g117130.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g118190.4.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g050750.2.1	No alias	transcription factor (DREB)	0.08	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc08g078180.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e007351_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e020274_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e025840_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e030090_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e036401_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e040879_P001	No alias	Ethylene-responsive transcription factor RAP2-6...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
BP	GO:0006351	transcription, DNA-templated	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
BP	GO:0032774	RNA biosynthetic process	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
MF	GO:0051087	chaperone binding	IEP	Neighborhood
BP	GO:0097659	nucleic acid-templated transcription	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	95	144

External Links

No external refs found!

LOC_Os02g34260.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation