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  5. LOC_Os02g35690.1

LOC_Os02g35690.1


Description : transcription factor (Trihelix)


Gene families : OG0000562 (Archaeplastida) Phylogenetic Tree(s): OG0000562_tree ,
OG_05_0000321 (LandPlants) Phylogenetic Tree(s): OG_05_0000321_tree ,
OG_06_0000571 (SeedPlants) Phylogenetic Tree(s): OG_06_0000571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g35690.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AT3G11100 No alias sequence-specific DNA binding transcription factors 0.03 Archaeplastida
AT3G24490 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.04 Archaeplastida
AT3G58630 No alias sequence-specific DNA binding transcription factors 0.02 Archaeplastida
Gb_18984 No alias transcription factor (Trihelix) 0.02 Archaeplastida
LOC_Os05g48690.1 No alias transcription factor (Trihelix) 0.04 Archaeplastida
MA_578116g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6829664g0010 No alias transcription factor (Trihelix) 0.02 Archaeplastida
Mp4g09730.1 No alias transcription factor (Trihelix) 0.02 Archaeplastida
Solyc02g076810.4.1 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Solyc12g010890.2.1 No alias transcription factor (Trihelix) 0.02 Archaeplastida
Zm00001e007998_P001 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Zm00001e010331_P002 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Zm00001e028191_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032412_P001 No alias transcription factor (Trihelix) 0.06 Archaeplastida
Zm00001e040951_P001 No alias transcription factor (Trihelix) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!