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  5. LOC_Os02g36360.1

LOC_Os02g36360.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0001722 (Archaeplastida) Phylogenetic Tree(s): OG0001722_tree ,
OG_05_0001208 (LandPlants) Phylogenetic Tree(s): OG_05_0001208_tree ,
OG_06_0003750 (SeedPlants) Phylogenetic Tree(s): OG_06_0003750_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g36360.1
Cluster HCCA: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034505001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
Gb_11550 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Smo58353 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Zm00001e014891_P002 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 174 195
No external refs found!