AMTR_s00002p00272050 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.658

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-4 component

Gene families : OG0003655 (Archaeplastida) Phylogenetic Tree(s): OG0003655_tree ,
OG_05_0004102 (LandPlants) Phylogenetic Tree(s): OG_05_0004102_tree ,
OG_06_0004916 (SeedPlants) Phylogenetic Tree(s): OG_06_0004916_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AMTR_s00002p00272050
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cre14.g610950 No alias Protein degradation.26S proteasome.20S core... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 3 169
No external refs found!