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  5. AMTR_s00002p00272120

AMTR_s00002p00272120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.664

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.xylogen-type arabinogalactan protein


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000223 (SeedPlants) Phylogenetic Tree(s): OG_06_0000223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00272120
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT1G03103 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 Archaeplastida
AT2G48130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 Archaeplastida
AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
GSVIVT01001181001 No alias No description available 0.05 Archaeplastida
GSVIVT01001350001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
GSVIVT01018010001 No alias No description available 0.05 Archaeplastida
Gb_01917 No alias classical arabinogalactan protein 0.03 Archaeplastida
Gb_02441 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_02443 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
Gb_02446 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Gb_02458 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida
Gb_06123 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_06428 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida
Gb_08579 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os01g59870.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os03g20760.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os03g57970.2 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os03g57980.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g07790.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os07g07860.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os07g07920.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g07930.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_113140g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_115537g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
MA_383975g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_50191g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_64802g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9903145g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g16210.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g21600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c11_11470V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
Pp3c1_31020V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
Pp3c2_6280V3.1 No alias glycosylphosphatidylinositol-anchored lipid protein transfer 1 0.02 Archaeplastida
Solyc01g073680.4.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc03g005200.3.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc03g005210.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g054030.2.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc06g054060.1.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc06g069110.4.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc09g065410.4.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g065420.3.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g065430.4.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g065440.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc09g082280.3.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g082290.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g082300.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g072030.3.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e005959_P003 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e005960_P003 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e005961_P001 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e011883_P002 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e028880_P001 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e032912_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e038813_P001 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 22 104
No external refs found!