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  5. LOC_Os02g38260.1

LOC_Os02g38260.1


Description : no description available(sp|c0hla0|gh5fp_chaob : 355.0)


Gene families : OG0001432 (Archaeplastida) Phylogenetic Tree(s): OG0001432_tree ,
OG_05_0001080 (LandPlants) Phylogenetic Tree(s): OG_05_0001080_tree ,
OG_06_0001174 (SeedPlants) Phylogenetic Tree(s): OG_06_0001174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g38260.1
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT1G13130 No alias Cellulase (glycosyl hydrolase family 5) protein 0.02 Archaeplastida
AT3G26140 No alias Cellulase (glycosyl hydrolase family 5) protein 0.04 Archaeplastida
GSVIVT01019433001 No alias No description available 0.03 Archaeplastida
GSVIVT01019434001 No alias No description available 0.05 Archaeplastida
GSVIVT01019436001 No alias No description available 0.06 Archaeplastida
Gb_13276 No alias no description available(sp|c0hla0|gh5fp_chaob : 569.0) 0.02 Archaeplastida
Gb_20405 No alias no description available(sp|c0hla0|gh5fp_chaob : 373.0) 0.03 Archaeplastida
Gb_20519 No alias no description available(sp|c0hla0|gh5fp_chaob : 178.0) 0.05 Archaeplastida
Gb_32318 No alias no description available(sp|c0hla0|gh5fp_chaob : 470.0) 0.05 Archaeplastida
MA_4391326g0010 No alias no description available(sp|c0hla0|gh5fp_chaob : 81.3) 0.02 Archaeplastida
MA_8507901g0010 No alias no description available(sp|c0hla0|gh5fp_chaob : 513.0) 0.03 Archaeplastida
Mp1g20450.1 No alias no description available(sp|c0hla0|gh5fp_chaob : 417.0) 0.03 Archaeplastida
Pp3c20_13240V3.1 No alias Cellulase (glycosyl hydrolase family 5) protein 0.05 Archaeplastida
Pp3c8_17170V3.1 No alias Cellulase (glycosyl hydrolase family 5) protein 0.05 Archaeplastida
Solyc08g081720.4.1 No alias no description available(sp|c0hla0|gh5fp_chaob : 383.0) 0.1 Archaeplastida
Zm00001e007796_P001 No alias no description available(sp|c0hla0|gh5fp_chaob : 285.0) 0.12 Archaeplastida
Zm00001e022886_P001 No alias no description available(sp|c0hla0|gh5fp_chaob : 334.0) 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 67 352
No external refs found!