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  5. LOC_Os02g38480.1

LOC_Os02g38480.1


Description : TNO1 vesicle trafficking tethering factor


Gene families : OG0002800 (Archaeplastida) Phylogenetic Tree(s): OG0002800_tree ,
OG_05_0001972 (LandPlants) Phylogenetic Tree(s): OG_05_0001972_tree ,
OG_06_0001718 (SeedPlants) Phylogenetic Tree(s): OG_06_0001718_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g38480.1
Cluster HCCA: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00254550 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00049p00185400 No alias Vesicle trafficking.SNARE target membrane recognition... 0.05 Archaeplastida
AT1G24460 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 Archaeplastida
AT4G31570 No alias CONTAINS InterPro DOMAIN/s: Prefoldin... 0.03 Archaeplastida
GSVIVT01010295001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
GSVIVT01033178001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01033179001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_07542 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc05g014200.3.1 No alias TNO1 vesicle trafficking tethering factor 0.03 Archaeplastida
Zm00001e013662_P003 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015026_P001 No alias TNO1 vesicle trafficking tethering factor 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!